| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 3399 |
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Bay of Bengal | Sea/Bay/Gulf | native | 3399 |
| Carigara Bay | Sea/Bay/Gulf | native | 46323 |
| Gulf of Oman | Sea/Bay/Gulf | native | 47613 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 3399 |
| Indian Ocean | Sea/Bay/Gulf | native | 3409 |
| Indonesian Sea | Sea/Bay/Gulf | native | 3399 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 43020 |
| Milne Bay | Sea/Bay/Gulf | native | 41468 |
| North Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45205 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3131 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 11441 |
| Ragay Gulf | Sea/Bay/Gulf | native | 47919 |
| Samar Sea | Sea/Bay/Gulf | native | 43018 |
| San Miguel Bay | Sea/Bay/Gulf | native | 43275 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46241 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 3399 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 2858 |
| Tayabas Bay | Sea/Bay/Gulf | native | 47573 |
| Visayan Sea | Sea/Bay/Gulf | native | 3557 |
| Yellow Sea | Sea/Bay/Gulf | native | 3399 |