| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Andaman Sea | Sea/Bay/Gulf | native | 3287 |
| Bay of Bengal | Sea/Bay/Gulf | native | 3287 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 7300 |
| East China Sea | Sea/Bay/Gulf | native | 3287 |
| Erh-jen-shi | Sea/Bay/Gulf | native | 43515 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 7300 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 3287 |
| Indian Ocean | Sea/Bay/Gulf | native | 7300 |
| Indonesian Sea | Sea/Bay/Gulf | native | 3287 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 38544 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7300 |
| Panguil Bay | Sea/Bay/Gulf | native | 47626 |
| Peng-hu Island | Sea/Bay/Gulf | native | 43515 |
| Sea of Japan/East Sea | Sea/Bay/Gulf | native | 559 |
| Sofronio Española | Sea/Bay/Gulf | native | 114805 |
| Sogod Bay | Sea/Bay/Gulf | native | 46392 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 3287 |
| Tung-hsiao | Sea/Bay/Gulf | native | 43510 |
| Yellow Sea | Sea/Bay/Gulf | native | 3287 |