| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Coral Sea and GBR | Sea/Bay/Gulf | native | 7300 |
| Dauin-Apo I. | Sea/Bay/Gulf | native | 127519 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 33390 |
| Indian Ocean | Sea/Bay/Gulf | native | 33390 |
| Indonesian Sea | Sea/Bay/Gulf | native | 8631 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Pacific Ocean | Sea/Bay/Gulf | native | 33408 |
| Red Sea | Sea/Bay/Gulf | native | 33390 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Spratly Islands | Sea/Bay/Gulf | native | 48445 |
| Tahiti I. | Sea/Bay/Gulf | native | 89972 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 53416 |
| Yellow Sea | Sea/Bay/Gulf | native |