| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Bay of Bengal | Sea/Bay/Gulf | native | 5736 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 27370 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 27370 |
| Indian Ocean | Sea/Bay/Gulf | native | 27370 |
| Indonesian Sea | Sea/Bay/Gulf | native | 27370 |
| Kuroshio Current | Sea/Bay/Gulf | native | 27370 |
| Mediterranean Sea | Sea/Bay/Gulf | introduced | 74657 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 27370 |
| Pacific Ocean | Sea/Bay/Gulf | native | 27370 |
| Panay Gulf | Sea/Bay/Gulf | native | 42831 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Ruerhmen River | River (basin) | native | 36073 |
| Shiliao River | River (basin) | native | 36073 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 27370 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |