| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Andaman Sea | Sea/Bay/Gulf | native | 5736 |
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Bay of Bengal | Sea/Bay/Gulf | native | 3280 |
| Carigara Bay | Sea/Bay/Gulf | native | 46323 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 7300 |
| Davao Gulf | Sea/Bay/Gulf | native | 126188 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 2334 |
| Gulf of Aden | Sea/Bay/Gulf | native | 5450 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Gulf of California | Sea/Bay/Gulf | native | 37955 |
| Gulf of Oman | Sea/Bay/Gulf | native | 47533 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 3280 |
| Honda Bay | Sea/Bay/Gulf | native | 71000 |
| Indian Ocean | Sea/Bay/Gulf | native | 2334 |
| Indonesian Sea | Sea/Bay/Gulf | native | 3280 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 583 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Lanuza Bay | Sea/Bay/Gulf | native | 104756 |
| Milne Bay | Sea/Bay/Gulf | native | 41468 |
| New Zealand Shelf | Sea/Bay/Gulf | native | 3280 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45205 |
| Pacific Central-American Coastal | Sea/Bay/Gulf | native | 9283 |
| Pacific Ocean | Sea/Bay/Gulf | native | 6192 |
| Panay Gulf | Sea/Bay/Gulf | native | 42831 |
| Panguil Bay | Sea/Bay/Gulf | native | 47626 |
| Peng-hu Island | Sea/Bay/Gulf | native | 43515 |
| Persian Gulf | Sea/Bay/Gulf | native | 47533 |
| Polynesian Waters | Sea/Bay/Gulf | native | 4517 |
| Ragay Gulf | Sea/Bay/Gulf | native | 38601 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| San Miguel Bay | Sea/Bay/Gulf | native | 43275 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46241 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| Sogod Bay | Sea/Bay/Gulf | native | 46392 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 12484 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 94637 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 2858 |
| Tahiti I. | Sea/Bay/Gulf | native | 4795 |
| Tai-chung | Sea/Bay/Gulf | native | 43515 |
| Tayabas Bay | Sea/Bay/Gulf | native | 47573 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 115274 |
| Yellow Sea | Sea/Bay/Gulf | native | 3280 |