| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 3289 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Erhjen River | River (basin) | native | 36073 |
| Gulf of Aden | Sea/Bay/Gulf | native | 5450 |
| Indian Ocean | Sea/Bay/Gulf | native | 1602 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7050 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 3289 |
| Kaoping River | River (basin) | native | 36073 |
| Kuroshio Current | Sea/Bay/Gulf | native | 1602 |
| North Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Pacific Ocean | Sea/Bay/Gulf | native | 1602 |
| Peng-hu Island | Sea/Bay/Gulf | native | 43515 |
| Polynesian Waters | Sea/Bay/Gulf | native | 3289 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Tahiti I. | Sea/Bay/Gulf | native | 89972 |
| Tai-chung | Sea/Bay/Gulf | native | 43515 |
| Tung-hsiao | Sea/Bay/Gulf | native | 43515 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |